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Data Analysis

Description

EMRs are a potentially valuable source of information about a patient’s history of health risk behaviors, such as excessive alcohol consumption or smoking. This information is often found in the unstructured (i.e., free) text of physician notes. It may be difficult to classify and analyze health risk behaviors because there are no standardized formats for this type of information1. As well, the completeness of the data may vary across clinics and physicians. The application of automated classification tools for this type of information could be useful for describing patterns within the population and developing disease risk prediction models.

Natural Language Processing (NLP) tools are currently used to process EMR free text in an automated and systematic way. However, these tools have primarily been applied to classify information about the presence or absence of disease diagnoses. The application of NLP tools to health risk behaviors, particularly alcohol use information from primary care EMRs, has thus far received limited attention. 

Objective

The research objective was to develop and validate an automated system to extract and classify patient alcohol use based on unstructured (i.e., free) text in primary care electronic medical records (EMRs).

Submitted by Magou on
Description

Technology that combines traditional manipulations with databases and complete visualization of geographic (spatial) analysis employing maps has been developed in order to explore the possibilities for Geographical Information Systems (GIS) to be used in sanitary and epidemiological surveillance system based on the analysis of morbidity and identification of influence of hazardous chemical environmental factors on human health. 

Submitted by Magou on

An Online Training Course

ISDS, in partnership with the Tufts University School of Medicine and Tufts Health Care Institute, has created an online course in syndromic surveillance. This program is designed to increase knowledge and foster collaboration between public health and clinical practitioners new to syndromic surveillance. This training is divided into four one-hour, self-paced modules and is available at no cost. Each module consists of a set of narrated slides. 

Submitted by elamb on

Presenters Mike Alletto and Nabarun Dasgupta will describe the process of how data are received, processed and brought forward to the front-end application in BioSense v2.0. Their presentation will include a technical overview of all of the steps that a set of data goes through from the receipt of raw data, deduplication, the binning process, and arrival in the application itself.

Presenters

Mike Alletto, BioSense Redesign Team 

Nabarun Dasgupta, BioSense Redesign Team

Learning Objectives