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An open source inventory to evaluate public health surveillance systems

Description

A variety of government reports have cited challenges in coordinating national biosurveillance efforts at strategic and tactical levels. The General Accountability Office (GAO), an independent nonpartisan agency that investigates how the federal government funding and performs analysis at the request of congressional committees or by public mandate, has published 64 reports on biosurveillance since 2005. The aim of this project is to better characterize these issues by collecting and analyzing a sample of publicly documented biosurveillance systems, and making our data and results available for the public health community to review and evaluate. This study openly publishes the data files of information collected (i.e. CSV, XLS), the Python NLP scripts, and a freely available web-based application developed in R Shiny that filters against the 227 biosurveillance systems and activities to promote a more transparent understanding of how public health practitioners conduct surveillance activities.

Objective

The objective of this project is to advance the science of biosurveillance by providing a user curated cataloging system, to be used across health department and other users, that advances daily surveillance operations by better characterizing three key issues in available surveillance systems: duplication in biosurveillance activities; differing perspectives and analyses of the same data; and inadequate information sharing.

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