Analysis of Three CRISPR Loci Among Yersinia pestis Stains from Georgia and Neighboring Countries

Particular family of tandem repeats, such as Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) found in a wide range of prokaryotic genomes. CRISPRs consist of highly conserved repeats interspaced with non-repetitive elements or "spacers" usually of viral origin. In the Yersinia pestis genome, three CRISPR elements YPa, YPb and YPc are found. The distribution of spacers and their arrays in Y. pestis strains is region and focus specific and can provide important information for genotyping and evolutionary research of bacteria.

Objective: The purpose of our study was CRISPR-based analysis of Y. pestis isolates from Georgia and neighboring countries.